| Gene | Zbtb6 |
| Chromosome | 2 |
| Deletion Start | 37,429,911 |
| Deletion End | 37,428,604 |
| Deletion Size | 1,308 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 37,429,655 | 37,429,674 | GGCTGGAAGTTGCTGTTGTC |
| TUP | 37,429,634 | 37,429,654 | CTGCTATACTGGAGCACTTGA |
| TUR | 37,429,585 | 37,429,606 | AAGGTAACTGGCAGCAGTCAAG |
| TDF | 37,428,874 | 37,428,898 | TCTTAATCGGCATATTCGAGGACAC |
| TDP | 37,428,843 | 37,428,872 | TGGGTATAAGGCCCTTTCAGTGTACTGTGT |
| TDR | 37,428,792 | 37,428,815 | GTATGTTCAAGTGGTCCTGAAGTG |
PCR Primers
| Primer | Sequence |
| SU | TTTGCTAGGAGACCTGTGGG |
| SD | AGCGATGTGCAACACTATGC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 90 bp | + | + | - |
| TDF | TDR | 107 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 15282A-C4 | VGB6 | C57BL/6NTac | |
| 15282A-D4 | VGB6 | C57BL/6NTac | |
| 15282A-H5 | VGB6 | C57BL/6NTac | |