Gene | Kctd10 |
Chromosome | 5 |
Deletion Start | 114,380,425 |
Deletion End | 114,365,588 |
Deletion Size | 14,838 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 5
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 114,379,873 | 114,379,896 | GCACCTGGATACCTACCTAATCAC |
TUP | 114,379,844 | 114,379,867 | TTGAGGCCCTAGGTGACCACACCT |
TUR | 114,379,802 | 114,379,823 | CCCATAACGCAGACAGCAACAG |
TDF | 114,366,490 | 114,366,511 | GAGGCTTTGGGAGATGTGGTTC |
TDP | 114,366,467 | 114,366,489 | CATGGGATCCTGGAGCTGGCAAC |
TDR | 114,366,413 | 114,366,432 | TGAGGTGGCTCAGAGGGTAG |
PCR Primers
Primer | Sequence |
SU | TGGGACTAAACGCCTGACTC |
SD | AGGAGAGCAAAGACTGCCTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 95 bp | + | + | - |
TDF | TDR | 99 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15394A-C8 | VGB6 | C57BL/6NTac | |
15394A-G12 | VGB6 | C57BL/6NTac | |