Gene | Parp12 |
Chromosome | 6 |
Deletion Start | 39,118,156 |
Deletion End | 39,087,272 |
Deletion Size | 30,885 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 39,117,836 | 39,117,859 | CTGCATCTCTGCAAGTTTCTCATC |
TUP | 39,117,809 | 39,117,834 | ACGGCAACTGCAAGTTCCTGAAGACC |
TUR | 39,117,788 | 39,117,806 | CCACCGTTGGCGTCCTTAC |
TDF | 39,087,681 | 39,087,703 | GCATCACCCATTGCTAGGATGTG |
TDP | 39,087,658 | 39,087,679 | TCTTCCAGTGCCCTGTGCAGCT |
TDR | 39,087,635 | 39,087,656 | AGCTCCCTGAAACGATACAGAC |
PCR Primers
Primer | Sequence |
SU | CACGACTCCCTCAGACGC |
SD | ACTTAGGCTCACAATCAATACTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 72 bp | + | + | - |
TDF | TDR | 69 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15401A-D1 | VGB6 | C57BL/6NTac | |
15401A-F10 | VGB6 | C57BL/6NTac | |
15401A-A7 | VGB6 | C57BL/6NTac | |
15401A-G8 | VGB6 | C57BL/6NTac | |