Gene | Tmem9b |
Chromosome | 7 |
Deletion Start | 109,752,175 |
Deletion End | 109,736,789 |
Deletion Size | 15,387 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 109,751,713 | 109,751,736 | CCCTCATCTCCCTGAAATCTTCTC |
TUP | 109,751,688 | 109,751,709 | TAGGGACTAGCTCCCCTCACCC |
TUR | 109,751,618 | 109,751,641 | GGCAAGGGAATCTGCTTATCAATG |
TDF | 109,736,867 | 109,736,884 | CCAGGAGCAGCGAAAGTC |
TDP | 109,736,844 | 109,736,866 | TGTCTTCGACCGACACGTTGTCC |
TDR | 109,736,790 | 109,736,810 | CCAGTTGTCTGCGTGTTCTTC |
PCR Primers
Primer | Sequence |
SU | TCTTCTGGTCAGGTCTCCTG |
SD | TGGCAAGAAAGAGAGAGCTTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 119 bp | + | + | - |
TDF | TDR | 95 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15465A-A7 | VGB6 | C57BL/6NTac | |
15465A-C11 | VGB6 | C57BL/6NTac | |
15465A-E2 | VGB6 | C57BL/6NTac | |
15465A-G11 | VGB6 | C57BL/6NTac | |