Gene | Elmo3 |
Chromosome | 8 |
Deletion Start | 105,309,906 |
Deletion End | 105,305,755 |
Deletion Size | 4,152 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 105,306,561 | 105,306,583 | AACCACATCCATCTTTCCTCTAC |
TUP | 105,306,584 | 105,306,606 | TGCTCCTGGCAGGATCTGAAGGC |
TUR | 105,306,636 | 105,306,654 | CAGCACCCTTCACGACTTG |
TDF | 105,308,961 | 105,308,979 | AATCCGCCAGCAGCGTTTG |
TDP | 105,308,981 | 105,309,007 | TCCGACTCTGTGAAGGAATGCTCTTCC |
TDR | 105,309,039 | 105,309,059 | CCACACCATCAGCCCATTCAG |
PCR Primers
Primer | Sequence |
SU | CTGGGTGGGTCACCTTACTG |
SD | ACATTCCTGTCGCTTCTTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 94 bp | + | + | - |
TDF | TDR | 99 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15498A-A6 | VGB6 | C57BL/6NTac | |
15498A-B4 | VGB6 | C57BL/6NTac | |
15498A-D9 | VGB6 | C57BL/6NTac | |
15498A-G2 | VGB6 | C57BL/6NTac | |
15498A-F7 | VGB6 | C57BL/6NTac | |
15498A-B12 | VGB6 | C57BL/6NTac | |