15591   Ddx56     Status: ES cell colonies screened / QC positives

GeneDdx56
Chromosome11
Deletion Start6,267,716
Deletion End6,259,166
Deletion Size8,551
Genome Build38
MGI IDMGI:1277172
NCBI Gene ID52513
BAC ID257P8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF6,267,5656,267,588CCTTCTTAGGCTGTCACCGATTTG
TUP6,267,5366,267,558TCGCGACCTACGTTGATCCAGGA
TUR6,267,5126,267,529TCCAGCGCCAGAGGAATG
TDF6,259,6246,259,642TGAGGCCCAGCATCTCTTC
TDP6,259,5996,259,620TTCCTGCTGCTCTTCGTGGCCT
TDR6,259,5666,259,587GGCACCTTTCTCCGTTTCTTTC

PCR Primers

PrimerSequence
SUTCTGGTTACCCACAGAACCC
SDGCAGGAACTACAGACAGGGC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR77 bp++-
TDFTDR77 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15591A-E3VGB6C57BL/6NTac
15591A-B5VGB6C57BL/6NTac