15646   Gfap     Status: ES cell colonies screened / QC positives

GeneGfap
Chromosome11
Deletion Start102,897,114
Deletion End102,888,600
Deletion Size8,515
Genome Build38
MGI IDMGI:95697
NCBI Gene ID14580
BAC ID373I5
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 11

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF102,896,188102,896,210GCTGTAGAGGTCAGGAAACAATC
TUP102,896,153102,896,180AAAGATCGGAACCAAGGGTCACACTCCA
TUR102,896,123102,896,142ATGCCCACCACCCAGCAAAG
TDF102,889,499102,889,520AAACCAGCCTGGACACCAAATC
TDP102,889,473102,889,496TGTCAGAAGGCCACCTCAAGAGGA
TDR102,889,443102,889,464CCCGCATCTCCACAGTCTTTAC

PCR Primers

PrimerSequence
SUGGTTCCTTGATCAATGGC
SDCTTCCAGCTCTGGCAACG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR88 bp++-
TDFTDR78 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
15646A-A9VGB6C57BL/6NTac
15646A-B4VGB6C57BL/6NTac
15646A-B11VGB6C57BL/6NTac
15646A-E2VGB6C57BL/6NTac
15646A-E4VGB6C57BL/6NTac