| Gene | Lman2 |
| Chromosome | 13 |
| Deletion Start | 55,362,586 |
| Deletion End | 55,346,845 |
| Deletion Size | 15,742 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 13
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 55,362,142 | 55,362,159 | GACGAGCGCAGCAAAGAG |
| TUP | 55,362,113 | 55,362,137 | CGATCTGGAACCACCAGGTGAGGCT |
| TUR | 55,362,058 | 55,362,076 | CTGACGAGGCAGGGACTAC |
| TDF | 55,347,279 | 55,347,297 | AGTGGGTGGCTGCTGTCTC |
| TDP | 55,347,253 | 55,347,278 | CAAAGGGATTGAGCAGTGACAGGCCA |
| TDR | 55,347,192 | 55,347,211 | CTTCAGAGGCCGCATGATTC |
PCR Primers
| Primer | Sequence |
| SU | CTTGTCGCTCATGAGAACCC |
| SD | CTACTGAACGGTCCTCCAGC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 102 bp | + | + | - |
| TDF | TDR | 106 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 15697A-C8 | VGB6 | C57BL/6NTac | |
| 15697A-D3 | VGB6 | C57BL/6NTac | |
| 15697A-D4 | VGB6 | C57BL/6NTac | |
