Gene | Blk |
Chromosome | 14 |
Deletion Start | 63,387,823 |
Deletion End | 63,373,290 |
Deletion Size | 14,534 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 14
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 63,387,687 | 63,387,704 | TCCGGGACAGGGTCTAAG |
TUP | 63,387,659 | 63,387,678 | TGCTCCCTGAAGCGGCTGCT |
TUR | 63,387,615 | 63,387,634 | GGCAGGGAATGGAACGAAAC |
TDF | 63,373,458 | 63,373,476 | GGAGCGGCCTACCTTTGAG |
TDP | 63,373,432 | 63,373,457 | TTCCTGCAGTCGGTGTTGGAGGACTT |
TDR | 63,373,367 | 63,373,387 | GGAGCCCTGAAGAGACCATTG |
PCR Primers
Primer | Sequence |
SU | TCGCCATTGACAGAGGAG |
SD | CCTGGAGGATTGACCCATAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 90 bp | + | + | - |
TDF | TDR | 110 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
15739A-C5 | VGB6 | C57BL/6NTac | |
15739A-H8 | VGB6 | C57BL/6NTac | |
15739A-F4 | VGB6 | C57BL/6NTac | |
15739A-H2 | VGB6 | C57BL/6NTac | |
15739A-G8 | VGB6 | C57BL/6NTac | |
15739A-H1 | VGB6 | C57BL/6NTac | |