Gene | 6330512M04Rik |
Chromosome | 7 |
Deletion Start | 142,371,097 |
Deletion End | 142,350,414 |
Deletion Size | 20,684 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 142,370,430 | 142,370,452 | AACCTCTTATCTTGGCCCATCTC |
TUP | 142,370,399 | 142,370,425 | AGCTCATTTGCCAGGCACTGATACTCA |
TUR | 142,370,362 | 142,370,383 | GTCATCAGGCTTCGGCATCTAC |
TDF | 142,350,970 | 142,350,990 | TGAGAAGGCCCATGCTAAATC |
TDP | 142,350,945 | 142,350,969 | TGAGACACATTCTGATGGCCGACCG |
TDR | 142,350,882 | 142,350,902 | TGTCAGCAAGAGTGGGACAAG |
PCR Primers
Primer | Sequence |
SU | CACAGGGATTTCCATCTC |
SD | CCAGACACACAAGGTTGTTTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 91 bp | + | + | - |
TDF | TDR | 109 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
16130A-C2 | VGB6 | C57BL/6NTac | |
16130A-F6 | VGB6 | C57BL/6NTac | |
16130A-E5 | VGB6 | C57BL/6NTac | |
16130A-E11 | VGB6 | C57BL/6NTac | |
16130A-D7 | VGB6 | C57BL/6NTac | |