Gene | Foxp4 |
Chromosome | 17 |
Deletion Start | 47,904,514 |
Deletion End | 47,867,314 |
Deletion Size | 37,201 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 17
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 47,903,866 | 47,903,885 | GGTCCCTGAACCATGCTGTG |
TUP | 47,903,836 | 47,903,862 | AGGTTGAACTTACAGGCACCAGTGGCC |
TUR | 47,903,801 | 47,903,825 | TCCCTTCCTTTCCTAGTACCTCTTG |
TDF | 47,867,943 | 47,867,962 | TCAGAGCGTGTGCATAGGTG |
TDP | 47,867,916 | 47,867,941 | TCTCTGACCTGAACATCACAGTGCGG |
TDR | 47,867,897 | 47,867,914 | GTTTCCAGCCGGGCTTTC |
PCR Primers
Primer | Sequence |
SU | CAATATGATGCTGTCTGCCC |
SD | CATCACCAATCTGAGCTGC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 85 bp | + | + | - |
TDF | TDR | 66 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
16206A-A7 | VGB6 | C57BL/6NTac | |
16206A-B1 | VGB6 | C57BL/6NTac | |
16206A-B9 | VGB6 | C57BL/6NTac | |