Gene | Hnrnpa2b1 |
Chromosome | 6 |
Deletion Start | 51,469,673 |
Deletion End | 51,463,381 |
Deletion Size | 6,293 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 51,469,137 | 51,469,160 | GACGTGTTTAGCGATTTTCCTTTC |
TUP | 51,469,106 | 51,469,133 | TGGAAGTCTTCATACCGTTTCGAGGTGG |
TUR | 51,469,071 | 51,469,090 | CAGGACGCTGAAGACCCAAG |
TDF | 51,464,040 | 51,464,063 | GGTGATTGGGAAGTCATGGAAGTC |
TDP | 51,464,010 | 51,464,036 | ACAGTTCTGCATCTCAGAAAGCGAGGA |
TDR | 51,463,964 | 51,463,986 | TTAACAGTTACACGAGGACACTC |
PCR Primers
Primer | Sequence |
SU | ACGGCGTTATTTCAAACTGC |
SD | TCTGCATCTGCTCTGGTGTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 90 bp | + | + | - |
TDF | TDR | 100 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
16361A-A6 | VGB6 | C57BL/6NTac | |
16361A-B10 | VGB6 | C57BL/6NTac | |
16361A-B12 | VGB6 | C57BL/6NTac | |
16361A-G10 | VGB6 | C57BL/6NTac | |
16361A-D8 | VGB6 | C57BL/6NTac | |
16361A-D3 | VGB6 | C57BL/6NTac | |