Gene | Klf9 |
Chromosome | 19 |
Deletion Start | 23,142,256 |
Deletion End | 23,141,758 |
Deletion Size | 499 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 19
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | | | GGAAGGATTATTGCACGCTGGT |
TUP | | | CACTATCGCCAAGAGCTTGTTGGACC |
TUR | | | TCTGGATGGGTCGGTATTTGTTG |
TDF | | | GAAACACGCCTCCGAAAAGAG |
TDP | | | CACAAGTGCCCCTACAGTGGCTGT |
TDR | | | AAGATGGGAGGATTTTCCATAGAC |
PCR Primers
Primer | Sequence |
SU | CACGTGTGGCATCTCTCCG |
SD | CGCAAGCCACTTGCTCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
16783A-F12 | VGB6 | C57BL/6NTac | |
16783A-E3 | VGB6 | C57BL/6NTac | |
16783A-E6 | VGB6 | C57BL/6NTac | |
16783A-G4 | VGB6 | C57BL/6NTac | |
16783A-A9 | VGB6 | C57BL/6NTac | |
16783A-G9 | VGB6 | C57BL/6NTac | |