Gene | Gpr89 |
Chromosome | 3 |
Deletion Start | 96,905,220 |
Deletion End | 96,871,376 |
Deletion Size | 33,845 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 96,904,851 | 96,904,869 | CGCGAGGTCCAAGTCTGAG |
TUP | 96,904,819 | 96,904,847 | TCCTTTGTGCAGTGACACCTCATCTTTCG |
TUR | 96,904,787 | 96,904,807 | CGACCCGCAAAGAGTGAACAG |
TDF | 96,871,466 | 96,871,489 | CACCGTTGGTTTGATGTCATCTTC |
TDP | 96,871,444 | 96,871,465 | CTGGTCAGTGCCCTCTCCAGCA |
TDR | 96,871,402 | 96,871,421 | GCTTCTCTGGTGCCTGTTTG |
PCR Primers
Primer | Sequence |
SU | GAGGACCTCGCACAACTCTC |
SD | CAAGCTGTGCTGGACAAGTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 88 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
16941B-D4 | VGB6 | C57BL/6NTac | |
16941B-F7 | VGB6 | C57BL/6NTac | |
16941C-E7 | VGB6 | C57BL/6NTac | |
16941C-C5 | VGB6 | C57BL/6NTac | |
16941C-C4 | VGB6 | C57BL/6NTac | |