Gene | Igfbp1 |
Chromosome | 11 |
Deletion Start | 7,202,071 |
Deletion End | 7,197,962 |
Deletion Size | 4,110 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 7,198,267 | 7,198,286 | GGGAGCCTGTGTACCAGAAC |
TUP | 7,198,293 | 7,198,313 | CACCCGCCACGAGCACCTTGT |
TUR | 7,198,360 | 7,198,380 | CACGTATGTCCCAGCCAAGAG |
TDF | 7,201,759 | 7,201,778 | CCAGAAGGGCATTGGCAGTG |
TDP | 7,201,784 | 7,201,809 | TGTTAGCCAGTGGGTATCTGTGCAGT |
TDR | 7,201,847 | 7,201,867 | GGTCAAGAGCAGCAAGAGATG |
PCR Primers
Primer | Sequence |
SU | GCAGCTTGCTGACAGAGTTG |
SD | CAGAACTTTGCAAGAGCTGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 114 bp | + | + | - |
TDF | TDR | 109 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17053B-H11 | VGB6 | C57BL/6NTac | |
17053C-B9 | VGB6 | C57BL/6NTac | |