17054   Agr2     Status: ES cell colonies screened / QC positives

GeneAgr2
Chromosome12
Deletion Start36,003,918
Deletion End35,995,520
Deletion Size8,399
Genome Build38
MGI IDMGI:1344405
NCBI Gene ID23795
BAC ID251G14
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 12

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF35,995,53035,995,550CAGTGTCTGCAATCCTGCTTC
TUP35,995,55235,995,576TGTGGCCATTTCTGGTACCTTGGCC
TUR35,995,58035,995,600TCCAGATTTGACTGTGGTGTC
TDF36,003,20936,003,231TGCTTCTGCACTAGCCACAATAG
TDP36,003,23436,003,260TGATGCTGACAGAGCTTGAATGGGTTC
TDR36,003,29636,003,314GCCCGGTTCTCAGTTCTTC

PCR Primers

PrimerSequence
SUCCCACATTACCTTCCAGCAC
SDAACAAACCAGAACCAAATAGCC
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR71 bp++-
TDFTDR106 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17054A-D1VGB6C57BL/6NTac
17054A-H8VGB6C57BL/6NTac
17054A-G6VGB6C57BL/6NTac