Gene | Timp3 |
Chromosome | 10 |
Deletion Start | 86,338,450 |
Deletion End | 86,300,857 |
Deletion Size | 37,594 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 86,300,925 | 86,300,944 | CACATGCTCTCCCAGCCATC |
TUP | 86,300,946 | 86,300,969 | CCAGGATGCCTTCTGCAACTCCGA |
TUR | 86,300,987 | 86,301,007 | GCCCAGGGAAACTGAGTCTTC |
TDF | 86,337,737 | 86,337,761 | TGCCTTAATCATCTCAGTCAAAGTC |
TDP | 86,337,763 | 86,337,787 | CACTAGGGAGTACCAGACGTTGCCA |
TDR | 86,337,791 | 86,337,812 | TGTTGTCTCCAGACATGCAGAG |
PCR Primers
Primer | Sequence |
SU | ATATCACTCTGCAGCCCTGG |
SD | AGCTATTGCTGTCTGGTTCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 83 bp | + | + | - |
TDF | TDR | 76 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17200A-D2 | VGB6 | C57BL/6NTac | |
17200A-E2 | VGB6 | C57BL/6NTac | |
17200A-E3 | VGB6 | C57BL/6NTac | |
17200A-G11 | VGB6 | C57BL/6NTac | |
17200A-G12 | VGB6 | C57BL/6NTac | |