Gene | Fabp1 |
Chromosome | 6 |
Deletion Start | 71,204,954 |
Deletion End | 71,199,930 |
Deletion Size | 5,025 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 6
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 71,199,958 | 71,199,980 | GCCAGGAGAACTTTGAGCCATTC |
TUP | 71,199,992 | 71,200,019 | AGGTGAGTGGTGATTATGACAGCAACGA |
TUR | 71,200,042 | 71,200,063 | TCAACACCAGACCTGGACTATC |
TDF | 71,204,148 | 71,204,170 | CACAGCCCAGGTGCCTAATAAAC |
TDP | 71,204,172 | 71,204,195 | CCTCTGCCCACTTGGCATTGGTGT |
TDR | 71,204,235 | 71,204,254 | GAGTGCATACCCAGCGTGTC |
PCR Primers
Primer | Sequence |
SU | TTACAGAGAGCTTTGCCCTTG |
SD | GGATCCCTGTCCTTATGCAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 106 bp | + | + | - |
TDF | TDR | 107 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17358A-B12 | VGB6 | C57BL/6NTac | |
17358A-C11 | VGB6 | C57BL/6NTac | |
17358A-D11 | VGB6 | C57BL/6NTac | |
17358A-E2 | VGB6 | C57BL/6NTac | |
17358A-H7 | VGB6 | C57BL/6NTac | |
17358A-E5 | VGB6 | C57BL/6NTac | |