Gene | Zfp105 |
Chromosome | 9 |
Deletion Start | 122,930,894 |
Deletion End | 122,925,111 |
Deletion Size | 5,784 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 9
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 122,925,726 | 122,925,744 | CCTGGCCTGAGTTCCTGAG |
TUP | 122,925,747 | 122,925,772 | TCCTGCCTTCACTACCCATGTACTGG |
TUR | 122,925,792 | 122,925,810 | AAGGGCAAGCCAAAGTGTG |
TDF | 122,929,944 | 122,929,968 | GGCTTTAGTCAGAGTGCAAATCTTG |
TDP | 122,929,969 | 122,929,994 | TTGTGCATCAACGAATCCACACTGGG |
TDR | 122,929,995 | 122,930,016 | CATGACACTCGAAGGGCTTCTC |
PCR Primers
Primer | Sequence |
SU | GCACTGGGTGGTCTGTGTAG |
SD | AGTCACAATCTGTCTGCTCCC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 85 bp | + | + | - |
TDF | TDR | 73 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17554A-H6 | VGB6 | C57BL/6NTac | |
17554A-F5 | VGB6 | C57BL/6NTac | |
17554A-F6 | VGB6 | C57BL/6NTac | |
17554A-G2 | VGB6 | C57BL/6NTac | |
17554A-H9 | VGB6 | C57BL/6NTac | |