Gene | 1700037H04Rik |
Chromosome | 2 |
Deletion Start | 131,153,609 |
Deletion End | 131,146,789 |
Deletion Size | 6,821 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 131,153,354 | 131,153,376 | ATATGCCAGTCCCTCTGTTCCAC |
TUP | 131,153,325 | 131,153,350 | TCGCAGTGTTAAAGGACATGAGGGCT |
TUR | 131,153,296 | 131,153,315 | GGCCCAGGTGTCTGATGTTC |
TDF | 131,147,676 | 131,147,695 | GCGCCAGTTTCAAGGGTATG |
TDP | 131,147,649 | 131,147,674 | AGCCGAGCACTGGCTTCAATTCCACA |
TDR | 131,147,608 | 131,147,627 | CGTCCGCTAAACAGCAAGTG |
PCR Primers
Primer | Sequence |
SU | CAGTAGGGTATCAGGCAGGG |
SD | ACAACCAGCAGTGGAGAAGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 81 bp | + | + | - |
TDF | TDR | 88 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17720A-H5 | VGB6 | C57BL/6NTac | |
17720A-B5 | VGB6 | C57BL/6NTac | |
17720A-H2 | VGB6 | C57BL/6NTac | |
17720A-C4 | VGB6 | C57BL/6NTac | |
17720A-C9 | VGB6 | C57BL/6NTac | |