Gene | Mrpl45 |
Chromosome | 11 |
Deletion Start | 97,328,760 |
Deletion End | 97,315,877 |
Deletion Size | 12,884 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 11
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 97,315,971 | 97,315,993 | GGGACACAAAGAGGAGGATAGAG |
TUP | 97,316,005 | 97,316,027 | AATCATGCTGTGGGCGTTGCTGA |
TUR | 97,316,036 | 97,316,059 | TCCAGATGAAGTCTGACTCGTATG |
TDF | 97,328,319 | 97,328,342 | GTCAAGCTCAAACGCTCTTCTTAG |
TDP | 97,328,345 | 97,328,365 | TCCACCTAGTGGCGAGACGGA |
TDR | 97,328,366 | 97,328,386 | CCTTCCCTAGAGCTGCATCAC |
PCR Primers
Primer | Sequence |
SU | CAGAGTCCCACAGAAGCCTC |
SD | GGTCTGATGCCACAGCTTG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 89 bp | + | + | - |
TDF | TDR | 68 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17758A-A2 | VGB6 | C57BL/6NTac | |
17758A-A4 | VGB6 | C57BL/6NTac | |
17758A-D5 | VGB6 | C57BL/6NTac | |
17758A-D9 | VGB6 | C57BL/6NTac | |
17758A-E1 | VGB6 | C57BL/6NTac | |
17758A-H6 | VGB6 | C57BL/6NTac | |