17812   Rad17     Status: ES cell colonies screened / QC positives

GeneRad17
Chromosome13
Deletion Start100,649,716
Deletion End100,617,579
Deletion Size32,138
Genome Build38
MGI IDMGI:1333807
NCBI Gene ID19356
BAC ID433C8
BAC LibrarybMQ
CassetteZEN-Ub1
Clones AvailableYes

Primer Genomic Coordinates on Chromosome 13

Please be aware that these oligonucleotides have been validated only by Taqman assay.

PrimerStartEndSequence
TUF100,649,637100,649,659GGTCATGTGGTGATTGCCTAAAG
TUP100,649,593100,649,622TTGTTTGTTCTCAGTGCTTTATGCCTGTCA
TUR100,649,552100,649,576TCAGATCACTGATTGTAACAGACAC
TDF100,618,468100,618,489TGGCTGCTTAAACTCAGAGGTC
TDP100,618,442100,618,466AGTGCCTGCCTTTGCCTCCTGAGTG
TDR100,618,409100,618,428AAGCTGGGCATGGTGCTCAC

PCR Primers

PrimerSequence
SUTACCATCATAGATAGATTATCTG
SDTGCAAACTGTAAGTAAGGCACAAG
LacInRTTGACTGTAGCGGCTGATGTTG
LacInfGGTAAACTGGCTCGGATTAGGG
NeoInRTACTTTCTCGGCAGGAGCAAGGTG
NeoInFTTCGGCTATGACTGGGCACAACAG
LacInZRevGTCTGTCCTAGCTTCCTCACTG
NeoFwdTCATTCTCAGTATTGTTTTGCC

Predicted PCR Products

Forward PrimerReverse PrimerLengthWTHETKO
SULacZRev bp-++
TUFTUR108 bp++-
TDFTDR81 bp++-
NeoFwdSD bp-++
LacInfLacInR210 bp-++
NeoInfNeoInR282 bp-++

Available Clones

ES Cell ordering information can be found at the KOMP Repository.
Clone NameParental ES CellMouse StrainCassette Copy Number
17812A-A11VGB6C57BL/6NTac
17812A-B4VGB6C57BL/6NTac
17812A-G2VGB6C57BL/6NTac
17812A-D11VGB6C57BL/6NTac
17812A-A12VGB6C57BL/6NTac
17812A-H9VGB6C57BL/6NTac