Gene | 1700021C14Rik |
Chromosome | 3 |
Deletion Start | 88,295,424 |
Deletion End | 88,282,764 |
Deletion Size | 12,661 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 88,294,791 | 88,294,812 | GTCCTCAAACTCGAAACAGTCC |
TUP | 88,294,769 | 88,294,790 | TGCTACAGCCTTCCCAGCTGCT |
TUR | 88,294,746 | 88,294,768 | AGGTAGTACATGCCTGTCAACTC |
TDF | 88,283,271 | 88,283,292 | TCTGTGACTTCCTGCTGGATAC |
TDP | 88,283,236 | 88,283,264 | TCAAGCAGGGAACTTACACAGACATGAGC |
TDR | 88,283,187 | 88,283,207 | TGCTCTGCTTCTCCTGTAGTG |
PCR Primers
Primer | Sequence |
SU | AAAACCAGACACCTCTATGAGA |
SD | GCAGCTGATGTCAGTGTGAAC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 67 bp | + | + | - |
TDF | TDR | 106 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17826A-A10 | VGB6 | C57BL/6NTac | |
17826A-B5 | VGB6 | C57BL/6NTac | |
17826A-B11 | VGB6 | C57BL/6NTac | |
17826A-D5 | VGB6 | C57BL/6NTac | |
17826A-F9 | VGB6 | C57BL/6NTac | |
17826A-D10 | VGB6 | C57BL/6NTac | |