| Gene | Tkt |
| Chromosome | 14 |
| Deletion Start | 30,573,524 |
| Deletion End | 30,549,277 |
| Deletion Size | 24,248 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 14
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 30,550,030 | 30,550,048 | CGAGGCCCACGCGAAATAG |
| TUP | 30,550,050 | 30,550,076 | AAGTTCTGGGCTAACGGTGTTTGCACA |
| TUR | 30,550,097 | 30,550,117 | CAGGCCCAATGGAGACCTTAG |
| TDF | 30,572,813 | 30,572,833 | AACTCAAGGAGCAGGGAAGAC |
| TDP | 30,572,834 | 30,572,859 | CCGGCAGTCACATAGCCTTCGAAAGC |
| TDR | 30,572,875 | 30,572,893 | AGAGGCCAGGAGAGGACAC |
PCR Primers
| Primer | Sequence |
| SU | GTGTGTGATTAATTCCAACAGG |
| SD | GTACACTGGCAAAGGAAGGG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 88 bp | + | + | - |
| TDF | TDR | 81 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 17841A-A1 | VGB6 | C57BL/6NTac | |
| 17841A-D11 | VGB6 | C57BL/6NTac | |
| 17841A-E3 | VGB6 | C57BL/6NTac | |
| 17841A-F10 | VGB6 | C57BL/6NTac | |