Gene | Tkt |
Chromosome | 14 |
Deletion Start | 30,573,524 |
Deletion End | 30,549,277 |
Deletion Size | 24,248 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 14
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 30,550,030 | 30,550,048 | CGAGGCCCACGCGAAATAG |
TUP | 30,550,050 | 30,550,076 | AAGTTCTGGGCTAACGGTGTTTGCACA |
TUR | 30,550,097 | 30,550,117 | CAGGCCCAATGGAGACCTTAG |
TDF | 30,572,813 | 30,572,833 | AACTCAAGGAGCAGGGAAGAC |
TDP | 30,572,834 | 30,572,859 | CCGGCAGTCACATAGCCTTCGAAAGC |
TDR | 30,572,875 | 30,572,893 | AGAGGCCAGGAGAGGACAC |
PCR Primers
Primer | Sequence |
SU | GTGTGTGATTAATTCCAACAGG |
SD | GTACACTGGCAAAGGAAGGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 88 bp | + | + | - |
TDF | TDR | 81 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17841A-A1 | VGB6 | C57BL/6NTac | |
17841A-D11 | VGB6 | C57BL/6NTac | |
17841A-E3 | VGB6 | C57BL/6NTac | |
17841A-F10 | VGB6 | C57BL/6NTac | |