Gene | Ccdc101 |
Chromosome | 7 |
Deletion Start | 126,672,769 |
Deletion End | 126,661,077 |
Deletion Size | 11,693 |
Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 7
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | | | CGAATTGCAGAGCTTCTCACAG |
TUP | | | CAGCTGATCAAGCAAACCCAGGTAAGA |
TUR | | | CCTCACCGCCCAGACTTTG |
TDF | | | CCTTCTGTTCCAGCACTGTTTC |
TDP | | | CCTTCTGTTTGCCCACAGGTATGAGGTA |
TDR | | | CACTCACTCTTTGCCTTCTTCATC |
PCR Primers
Primer | Sequence |
SU | ATAATGTTCCTGTGATTTGGAAAC |
SD | CCGCTGTCAAATATGAGTGG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
17969A-F1 | VGB6 | C57BL/6NTac | |
17969A-F3 | VGB6 | C57BL/6NTac | |
17969A-F5 | VGB6 | C57BL/6NTac | |
17969A-B10 | VGB6 | C57BL/6NTac | |