| Gene | Mrps21 |
| Chromosome | 3 |
| Deletion Start | 95,870,573 |
| Deletion End | 95,862,745 |
| Deletion Size | 7,829 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 3
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 95,870,450 | 95,870,468 | ACCAGCCGTGGGAAATGTG |
| TUP | 95,870,425 | 95,870,446 | TGATCCTGCACCCAGCCTACCA |
| TUR | 95,870,395 | 95,870,413 | GAGCTGGCACCAGTGGTAG |
| TDF | 95,863,688 | 95,863,708 | TGTGGGACATGGGAAATGGTG |
| TDP | 95,863,660 | 95,863,685 | TGAGGCTGTTGCAATGCTCTCCTTTG |
| TDR | 95,863,631 | 95,863,651 | AAACACAGGCCCTCGTCATAG |
PCR Primers
| Primer | Sequence |
| SU | CGTAGTGAAAGAAATGTTGCTAAC |
| SD | CTAGCAACAAATATTACTGCTCC |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 74 bp | + | + | - |
| TDF | TDR | 78 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 18011A-A7 | VGB6 | C57BL/6NTac | |
| 18011A-A11 | VGB6 | C57BL/6NTac | |
| 18011A-C4 | VGB6 | C57BL/6NTac | |
| 18011A-G12 | VGB6 | C57BL/6NTac | |