Gene | Grk6 |
Chromosome | 13 |
Deletion Start | 55,459,406 |
Deletion End | 55,445,512 |
Deletion Size | 13,895 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 13
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | 55,446,381 | 55,446,400 | AACTCCAGGGAGGGACACAG |
TUP | 55,446,401 | 55,446,426 | TGACAGCTTTCCACTTTCTGCTGGGT |
TUR | 55,446,443 | 55,446,466 | GATATAGAACAGCGAAGCTGAAGG |
TDF | 55,458,989 | 55,459,007 | TCACCGCTTCCTGTTCCTG |
TDP | 55,459,017 | 55,459,039 | TGGAGACCGAGTGCTTCCAGGAA |
TDR | 55,459,046 | 55,459,065 | GACCCATCCAGCCCAAAGAC |
PCR Primers
Primer | Sequence |
SU | CTCTCCGCAGGGAGCGAG |
SD | GCACAGCGTTGCTGTTAGTC |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
TUF | TUR | 86 bp | + | + | - |
TDF | TDR | 77 bp | + | + | - |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
18300A-C10 | VGB6 | C57BL/6NTac | |
18300A-D3 | VGB6 | C57BL/6NTac | |