| Gene | Spire2 |
| Chromosome | 8 |
| Deletion Start | 123,369,425 |
| Deletion End | 123,332,768 |
| Deletion Size | 36,658 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 8
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | 123,333,107 | 123,333,127 | GGCCTCGACCTTTCTCACATC |
| TUP | 123,333,132 | 123,333,155 | CCCAGATAGCGCTCTACCGGACCG |
| TUR | 123,333,174 | 123,333,195 | ACAAGGAGTCCCAGATCCAGAG |
| TDF | 123,369,256 | 123,369,275 | CAGTGACTGCACCAGCTTTG |
| TDP | 123,369,276 | 123,369,296 | TGGCTGATGTCGTGTGCTCCA |
| TDR | 123,369,317 | 123,369,335 | GTCGTGGAGTGGCATTGAG |
PCR Primers
| Primer | Sequence |
| SU | GGTTTCTAACAAACCTTAGTCC |
| SD | AAGCTGCCACACACTCACTG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| TUF | TUR | 89 bp | + | + | - |
| TDF | TDR | 80 bp | + | + | - |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 18335A-D1 | VGB6 | C57BL/6NTac | |