| Gene | Slc39a3 |
| Chromosome | 10 |
| Deletion Start | 81,033,818 |
| Deletion End | 81,030,903 |
| Deletion Size | 2,916 |
| Genome Build | 38 |
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Primer Genomic Coordinates on Chromosome 10
Please be aware that these oligonucleotides have been validated only by Taqman assay.
| Primer | Start | End | Sequence |
| TUF | | | GTGAGCCCAGTGGGTAGTG |
| TUP | | | TTCAGACAGAGCAGTTGCCCACTCC |
| TUR | | | CCGATGGAGAGGAAGCAACAG |
| TDF | | | TGGCACCTTCCTGTTTGTCAC |
| TDP | | | TTCCTGGAGATCCTGGCCAAGGA |
| TDR | | | AGCTGCTCGCTCCTCTCCTC |
PCR Primers
| Primer | Sequence |
| SU | GTCTGAGGTCCTGCCTGC |
| SD | CAAGAAGGGCTGTTCCTGAG |
| LacInR | TTGACTGTAGCGGCTGATGTTG |
| LacInf | GGTAAACTGGCTCGGATTAGGG |
| NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
| NeoInF | TTCGGCTATGACTGGGCACAACAG |
| LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
| NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
| Forward Primer | Reverse Primer | Length | WT | HET | KO |
| SU | LacZRev | bp | - | + | + |
| NeoFwd | SD | bp | - | + | + |
| LacInf | LacInR | 210 bp | - | + | + |
| NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
| Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
| 19012A-E1 | VGB6 | C57BL/6NTac | |
| 19012A-F4 | VGB6 | C57BL/6NTac | |
| 19012A-F9 | VGB6 | C57BL/6NTac | |
