Gene | Ddrgk1 |
Chromosome | 2 |
Deletion Start | 130,664,562 |
Deletion End | 130,654,146 |
Deletion Size | 10,417 |
Genome Build | 38 |
|
|
Primer Genomic Coordinates on Chromosome 2
Please be aware that these oligonucleotides have been validated only by Taqman assay.
Primer | Start | End | Sequence |
TUF | | | TTTGGTAGGCCCTCGACTC |
TUP | | | TGCGCATGCACTGACGAGCTTTC |
TUR | | | CACAAGCTCCTCGTAAGCACAG |
TDF | | | GAGAAATGATGGGTCTGTGGGTATG |
TDP | | | AACCACGAAACGAGCTCTGAGACTTGGT |
TDR | | | CGGTTTATGGCGTCCTGTGAG |
PCR Primers
Primer | Sequence |
SU | TGGGATGGCAAGCAAATGTG |
SD | TGGAGGAGATATGGCCTGAG |
LacInR | TTGACTGTAGCGGCTGATGTTG |
LacInf | GGTAAACTGGCTCGGATTAGGG |
NeoInR | TACTTTCTCGGCAGGAGCAAGGTG |
NeoInF | TTCGGCTATGACTGGGCACAACAG |
LacInZRev | GTCTGTCCTAGCTTCCTCACTG |
NeoFwd | TCATTCTCAGTATTGTTTTGCC |
Predicted PCR Products
Forward Primer | Reverse Primer | Length | WT | HET | KO |
SU | LacZRev | bp | - | + | + |
NeoFwd | SD | bp | - | + | + |
LacInf | LacInR | 210 bp | - | + | + |
NeoInf | NeoInR | 282 bp | - | + | + |
Available Clones
ES Cell ordering information can be found at the
KOMP Repository.
Clone Name | Parental ES Cell | Mouse Strain | Cassette Copy Number |
19311A-C1 | VGB6 | C57BL/6NTac | |
19311A-C4 | VGB6 | C57BL/6NTac | |
19311A-E10 | VGB6 | C57BL/6NTac | |
19311A-H5 | VGB6 | C57BL/6NTac | |